Publications and Presentations

Recent Publications and Presentations by CEDB Faculty and Researchers


2017

Cesbron F., Geslin E., Le Kieffre C., Nardelli M.P., Langlet D., Mabilleau G., Jorissen F., Jézéquel D. and Metzger E. Sequestered chloroplasts in the benthic foraminifer Haynesina germanica: cellular organization, oxygen fluxes and potential ecological implications. Journal of Foraminiferal Research (in press)

Nienow, J., R.A. Snyder, W.H. Jeffrey, and S. Wise Jr. 2017. Fine structure and ecology of Nanoneis longta in the northeastern Gulf of Mexico with a revised definition of the species. Diatom Research 32:43-58. doi.org/10.1080/0269249X.2016.1268978.

Walsh, J.J., J.M. Lenes, R.H. Weisberg, L. Zheng, C. Hu, K.A. Fanning, R.A. Snyder, and J. Smith. 2017. More surprises in the global greenhouse: human health impacts from recent toxic marine aerosol formations, due to centennial alterations of world-wide coastal food webs. Marine Pollution Bulletin DOI: 10.1016/j.marpolbul.2016.12.053 [Epub ahead of print]

Konstantinidis, K., Y. Wang, J. Hatt, D. Tsementzi, L. Rodriguez, C. Ruiz-Perez, M. Weigand, H. Kizer, G. Maresca, R. Krishnan, R. Poretsky, and J. C. Spain. 2017. Quantifying the importance of the rare biosphere for microbial community response to organic pollutants in a freshwater ecosystem. Appl. Environ.
Microbiol. 83 (8) e03321-16.

Kurt, Z., M. Minoia, and J.C. Spain. 2017. Resveratrol as a growth substrate for bacteria from the rhizosphere. Environmental Microbiol. Submitted.

Mahan, K.M., H. Zheng, T.T. Fida, R.J. Parry, D.E. Graham and J.C. Spain. 2017. A novel, iron-dependent enzyme that catalyzes the initial step in the biodegradation of N-nitroglycine by Variovorax sp strain JS1663. Appl. Environ. Microbiol. In
Press.

2016

Caffrey, J.M., J.T. Hollibaugh, B. Mortazavi. 2016. Living oysters and their shells as sites of nitrification and denitrification. Marine Pollution Bulletin. 112:86-90. http://dx.doi.org/10.1016/j.marpolbul.2016.08.038.

Caffrey, J.M. and M.C. Murrell. 2016. A historical perspective on eutrophication in the Pensacola Bay estuary, FL, USA. pp. 199-213 In P. Glibert and T. Kana (eds). Aquatic Microbial Ecology and Biogeochemistry: A Dual Perspective. Invited book chapter.

Hester, C.M., H. M. Smith, M. Head, H. Langsten, S. Linder, L. Sartory, E. Manor, J. Norman and J. M. Caffrey. 2016. Comparing production and biogeochemistry of native and transplanted Thalassia testudinum and Halodule wrightii in Big Lagoon, Florida, USA. Gulf of Mexico Science.

Holmes, C.D., N.P. Krishnamurthy, J.M. Caffrey, W.M. Landing, E.S. Edgerton, K.R. Knapp, U.S Nair. 2016. Thunderstorms increase mercury wet deposition. Environmental Science and Technology. 50:9343-9350 DOI:
10.1021/acs.est.6b02586.

Metzger E., Thibault de Chanvalon A., Cesbron F., Barbe A., Launeau P., Jezequel D. and Mouret A., 2016. Simultaneous nitrite/nitrate imagery at submillimiter scale through the water-sediment interface, Environmental Science and Technology. 50: 8188–8195

Andrews, A.H., E.E. Demartini, J.A. Eble, D.C. Lou, B.M. Taylor, R. Humphreys (2016) Age and growth of bluespine unicornfish (Naso unicornis): a half-century lifespan for a keystone browser, with a novel approach to bomb radiocarbon dating in the Hawaiian Islands. Canadian Journal of Fisheries and Aquatic Sciences 73: 1-12.

Coleman, R., J.A. Eble, J.D. DiBattista, L.A. Rocha, J.E. Randall, M.L. Berumen, B.W. Bowen (2016). Regal phylogeography: range-wide survey of the marine angelfish Pygoplites diacanthus reveals evolutionary partitions between the Red Sea, Indian Ocean, and Pacific Ocean. Molecular Phylogenetics and Evolution 100:243 – 253.

Franck, A.R., L.C. Anderson, J.R. Burkhalter, and S. Dickman. 2016. Additions to the Flora of Florida, U.S.A. (2010-2015). J. Bot. Res. Inst. Texas 10: 175-190.

Billerbeck, S., B. Wemheuer, S. Voget, A. Poehlein, H-A. Giebel, T. Brinkhoff, L. Gram, W.H. Jeffrey, R. Daniel, and M. Simon. 2016. CHAB-I-5: Biogeography and environmental genomics of the pelagic Roseobacter lineage CHAB-I-5. Nature Microbiology. doi:10.1038/nmicrobiol.2016.63.

Hernández, K., B. Yannicelli, L.M. Olsen, C. Dorador, R. Menschel, V. Molina, F. Remonsellez, and W.H. Jeffrey. 2016. Microbial Activity Response to Solar Radiation across Contrasting Environmental Conditions in Salar de Huasco, Northern Chilean Altiplano. Frontiers in Microbiology. doi: 10.3389/fmicb.2016.01857.

Moss, J.A., C. McCurry, P. Schwing, W.H. Jeffrey, I.C. Romero, D.J. Hollander, and R.A. Snyder. 2016. Molecular characterization of benthic foraminifera communities from the Northeastern Gulf of Mexico shelf and slope following the Deepwater Horizon Event. Deep Sea Research I 115: 1-9.

Nienow, J.A., R.A. Snyder, W.H. Jeffrey, and S. Wise, Jr. 2016. Fine Structure and ecology of Nanoneis longta in the northeastern Gulf of Mexico with a revised definition of the species. Diatom Research. doi.org/10.1080/0269249X.2016.1268978.

Pérez, V., M. Hengst, L. Kurte, C. Dorador, W.H. Jeffrey, R. Wattiez, S. Matallana-Surget. 2016. Adaptation to Extreme UV Radiation: A comparative proteomics study of Rhodobacter sp, isolated from high altitude wetlands in Chile. Frontiers in Microbiology (In press).

Vaughan, P.A., T. Wilson, R. Kamerman, M. Ederington-Hagy, A. McKenna, H. Chen, and W.H. Jeffrey. 2016. Photochemical Changes in Water Accommodated Fractions of MC252 and Surrogate Oil Created during Solar Exposure as determined by FT-ICRMS. Marine Pollution Bulletin 104: 262-268.
DOI:10.1016/j.marpolbul.2016.01.012.

Moss, J.A. Waterborne Pathogens Review. 2016. Radiologic Technology. 88(1):27-48.

Moss, J.A., C. McCurry, P. Schwing, W.H. Jeffrey, I.C. Romero, D.J. Hollander, and R.A. Snyder. 2016. Molecular charcterization of benthic foraminifera communities from the Northeastern Gulf of Mexico shelf and slope following the Deepwater Horizon event. Deep-Sea Research I 115:1-9.

Selkoe, K., E. Treml, J. Wren, O. Gaggiotti, M. Donovan, Hawaii Reef Connectivity Consortium (J. Eble) (2016). Community genetics of Hawaiian reefs reflect habitat, history, thermal stress, and ecology. Proceedings of the Royal Society of London Series B 283: 20160354.

Dahl K., Patterson III W., Snyder R. (2016). The effectiveness of lionfish removals to mitigate reef fish community shifts on northern Gulf of Mexico artificial reefs. Marine Ecology Progress Series DOI:10.3354/meps11898.

Rehman, Z., Toms, C. N., and Finch, C. (2016). Estimating abundance: A nonparametric mark recapture approach for open and closed systems. Environmental and Ecological Statistics, 23(4) 623-638.

Chen, Y., D. Hou, C. Lu, J.C. Spain, J. Luo. 2016. Effects of rate-limited mass transfer on modeling vapor intrusion with aerobic biodegradation. Environ. Sci. Technol. 50:9400-9406.

Kurt. Z., E.E. Mack and J.C. Spain. 2016. Natural attenuation of non-volatile contaminants in the capillary fringe. Environ. Sci. Technol. 50:10172–10178.

Kalyoncu1, S., D.P. Heaner, Z. Kurt, C.M. Bethel, C.U. Ukachukwu, S. Chakravarthy, J.C. Spain, and R.L. Lieberman. 2016. Enzymatic hydrolysis by transition-metal-dependent nucleophilic aromatic substitution. Nature Chem. Biol. 12:1031-1036.

Karthikeyan, S. and J.C. Spain. 2016. Biodegradation of 2,4-dinitroanisole (DNAN) by Nocardioides sp. JS1661 in water, soil and bioreactors. J. Haz. Materials 312:37-44.

Karthikeyan, S., and J.C. Spain. 2016. Immobilized biocatalyst for detection and destruction of the insensitive explosive, 2,4-dinitroanisole (DNAN). Environ. Sci. Technol. 50:11193–11199.

Yan, X., T. Gu, Z. Yi, J. Huang, X. Liu, J. Zhang, X. Xu, Z. Xin, Q. Hong, J. He, J.C. Spain, S. Li, and J. Jiang. 2016. Comparative genomic analysis of isoproturon-mineralizing sphingomonads reveals the isoproturon catabolic mechanism. Environ. Microbiol. DOI: 10.1111/1462-2920.13413.

Plummer, S.M., Plummer, M.A., Merkel, P.A., Hagen, M., Biddle, J.F., and Waidner, L.A. (2016). Using directed evolution to improve hydrogen production in chimeric hydrogenases from Clostridia species. Enzyme Microb. Technol. 93–94, 132–141.

2015

Das, R. W. Landing, M. Bizimis, L. Odum and J. Caffrey. 2015. Mass independent fractionation of mercury isotopes as source tracers in sediments. Procedia Earth and Planetary Science 13: 151-157. doi:10.1016/j.proeps.2015.07.036.

Eble, J., B. Bowen, G. Bernardi (2015). Reef fish phylogeography. In: Ecology and Conservation of Fishes on Coral Reefs: The functioning of an ecosystem in a changing world, C. Mora (ed.). University of Hawaii Press, Honolulu, Hawaii, USA. ISBN: 9781107089181. 

Meyer, W., J. Eble, K. Franklin, R. McManus*, S. Brantley*, J. Henkel*, P. Marek, W.E. Hall, C. Olson, R. McInroy*, E. Bernal Loaiza*, R. Brusca, W. Moore (2015). Ground-dwelling arthropod communities of a Sky Island mountain range in Southeastern Arizona, USA: Obtaining a baseline for assessing the effects of climate change. PLoS One. DOI:10.1371/journal.pone.0135210.

Cherrier, J., S. Valentine, B, Hamill, W.H. Jeffrey, and J.F. Marra. 2015. Light-mediated release of dissolved organic carbon by phytoplankton: implications for carbon cycling. Journal of Marine Systems 147: 45-51. DOI: 10.1016/j.jmarsys.2014.02.008.

Cooke, S.L., J.M. Fisher, K. Kessler, C.E. Willaimson, R.W. Sanders, D.P. Morris, J.A. Porter, W.H. Jeffrey, S.B. DeVaul, and J.D. Pakulski. 2015. Direct and indirect effects of chromophoric dissolved organic matter additions on zooplankton in an oligotrophic lake. Freshwater Biology 60: 2362-2378

Moss, J.A., C. McCurry, S. Tominack, I.C. Romero, D. Hollander, W.H. Jeffrey, and R.A. Snyder. 2015. Ciliate protists from the sediment-water interface in the Northeastern Gulf of Mexico. Deep Sea Research I 106: 85-96.

Walsh, J.J., J.M. Lenes, B.P. Darrow, A.A. Parks, R.H. Weisberg, L. Zheng, C. Hu, B.B. Barnes, K.L. Daly, S.-I. Shin, G.R. Brooks, W.H. Jeffrey, R.A. Snyder, D. Hollander. 2015. A simulation analysis of the plankton fate of the Deepwater Horizon oil spills. Continental Shelf Research 107: 50–68.

Moss, J.A., C. McCurry, S. Tominack, I.C. Romero, D. Hollander, W.H. Jeffrey, R.A. Snyder. 2015. Ciliate protists from the sediment-water interface in the Northeastern Gulf of Mexico. Deep Sea Reasearch 106:85-96.

Hamilton, P., K. Speer, R. Snyder, and R.R. Leben. 2015. Cold Shelf Break Events in the De Soto Canyon. Continental Shelf Research 110:25-38.

2014

Caffrey, J.M., M.C. Murrell, K.R.S Amacker, J. Harper, S. Phipps, and M. Woodrey. 2014 Sustained observations of estuarine metabolism in 3 estuaries in the northeast Gulf of Mexico. Estuaries and Coasts invited Special Issue, “Drivers of Change in Shallow Coastal Photic Systems" 37: 222-241.
http://dx.doi.org/10.1007/s12237-013-9701-5

Brusca, R.C., W.M. Meyer, J. Overpeck, K. Franklin, J.F Wiens, J. Eble, W. Moore (2014). Reply to C. Bertelsen: Review of plant elevation changes in Arizona. Phytoneuron 2014-111: 1-4.

DeMartini, E., R. Langston, J. Eble (2014). Spawning seasonality and body sizes at sexual maturity in the Bluespine Unicornfish, Naso unicornis (Acanthuridae). Ichthyological Research, 61(3): 243-251.

Selkoe, K., O. Gaggiotti, K. Andrews, M. Bernal, H. Bolick, I. Baums, R. Coleman, G. Concepcion, M. Craig, J. DiBattista, J. Eble, I. Fernandez-Silva, M. Gaither, M. Iacchei, N. Polato, M. Rivera, L. Rocha, D. Skillings, M. Timmers, Z. Szabo, B. Bowen, R. Toonen (2014). Emergent patterns of population genetic structure for a
coral reef community. Molecular Ecology, 23(12): 3064-3079.

Joye, S., J. Montoya, S. Murawski, T. Özgökmen, T. Wade, R. Montuoro, B Roberts, D. Hollander, W. H. Jeffrey, J. Chanton, and C. Wilson. 2014. Fast Action: A Collaborative, Multi-Disciplinary Rapid Response Study of the Hercules Gas Well Blowout. EOS Trans. AGU. 95: (38) 341-342.

Meador, J.A., A.J. Baldwin, J.D. Pakulski, W.H. Jeffrey, D.L. Mitchell, and T. Douki. 2014. The significance of the Dewar valence photoisomer as an ultraviolet radiation induced DNA photoproduct in marine microbial communities. Environmental Microbiology 16: 1808-1820. DOI: 10.1111/1462-2920.12414.

Snyder, R.A., M. Ederington-Hagy, F. Hileman, J. Moss, L. Amick, R. Carruth, M. Head, J. Marks, J. Nienow, and W.H. Jeffrey. 2014. Polycyclic aromatic hydrocarbon concentrations across the Florida Panhandle continental shelf and slope after the BP MC 252 well failure. Marine Pollution Bulletin 89: 201-208.

Moss, J.A. Gene Therapy Review. 2014. Radiologic Technology, November/December, Volume 86, Number 2, 155-184.

Moss, J.A., R. Snyder and J. Gordy. 2014. Effective concentration and detection of Cryptosporidium, Giardia, and Microsporidia from environmental matrices. Journal of Pathogens, vol. 2014, Article ID 408204, 10 pages, 2014. doi:10.1155/2014/408204.

Snyder, R.A., M. Ederington-Hagy, F. Hileman, J.A. Moss, L. Amick, R. Carruth, M. Head, J. Marks, and W.H. Jeffrey. 2014. Polycyclic aromatic hydrocarbon concentrations across the Florida Panhandle continental shelf and slope after the BP MC 252 well failure. Marine Pollution Bulletin 89:201-208.

Snyder, R.A., A.Vestal, C. Welch, G. Barnes, R. Pelot, M., M. Ederington-Hagy, and F. Hileman. 2014. PAH concentrations in Coquina (Donax spp.) on a sandy beach shoreline impacted by a marine oil spill. Marine Pollution Bulletin 83:87-91.

2013

Forest, A., M. Babin, S. Bélanger, L. Stemmann, M. Picheral, M. Sampei, L. Fortier, Y. Gratton, E. Devred, P.j. Sahlin, D. Doxaran, F. Joux, Eva Ortega-Retuerta, W.H. Jeffrey, J. Martin, B. Gasser, J.C. Miquel. 2013. Ecosystem function and particle flux dynamics across the Mackenzie Shelf (Beaufort Sea, Arctic Ocean): an integrative analysis of spatial variability and biophysical forcings. Biogeosciences 10: 2833-2866, doi:10.5194/bg-10-2833-2013.

Ortega-Retuerta, E., F. Joux, W.H. Jeffrey, and J-F. Ghiglione. 2013. Spatial variability of particle-attached and free-living bacterial diversity in surface waters from the Mackenzie River to the Beaufort Sea (Canadian Arctic). Biogeosciences 10: 2747-2759 DOI 10.5194/bg-10-2747-2013.

Moss, J.A. 2013. HIV/AIDS Review. Radiologic Technology January/Februrary 2013, Vol. 84, No 3 247-267.

Allison, J.G., M. E. Wagner, M. McAllister, A. K. J. Ren, and R. A. Snyder. 2013. Sand bottom microalgal production and benthic nutrient fluxes on the northeastern Gulf of Mexico nearshore shelf. Gulf and Caribbean Research 25: 1-8.

2012

Bagui, S., J. Brown, J. Caffrey, S. Bagui. 2012. Designing a relational database for tracking and analysis of atmospheric deposition of mercury and trace metals in the Pensacola Bay Watershed. International Journal of Sustainable Society. 4: 240-265.

Mortazavi, B., A.A. Riggs, J.M. Caffrey, H. Genet, and S.W. Phipps. 2012. The contribution of benthic nutrient regeneration to primary production in a shallow eutrophic estuary, Weeks Bay, Alabama. Estuaries and Coasts. 35:862-877.

Yvon-Durocher, G., J. M. Caffrey, A. Cescatti, M. Dossena, P. del Giorgio, J.M. Gasol, J.M. Montoya, J. Pumpanen, P.A. Staehr, M. Trimmer, G. Woodward & A.P. Allen. 2012. Reconciling differences in the temperature-dependence of ecosystem respiration across time scales and ecosystem types. Nature 487: 472-476.

Ortega-Retuerta, E., W.H. Jeffrey, M. Babin, S. Bélanger, R. Benner, D. Marie, A. Matsuoka,P. Raimbault, and F. Joux. 2012. Carbon fluxes in the Western Arctic Ocean: Patterns and drivers of bacterial abundance, production and respiration on the Beaufort Sea margin. Biogeosciences 9: 3679-3692. DOI 10.5194/bg-9-3679-2012.

Ortega-Retuerta, E., W.H. Jeffrey, J-F. Ghiglione, and F. Joux. 2012. Evidence of heterotrophic prokaryotic activity limitation by nitrogen in the Western Arctic Ocean during summer. Polar Biology 35: 785-794. DOI 10.1007/s00300-011-1109-8

2011

Arnosti, C., A.D. Steen, K. Ziervogel, S. Ghobrial, and W.H. Jeffrey. 2011. Latitudinal gradients in degradation of marine dissolved organic carbon. PLoS ONE 6(12): e28900. doi:10.1371/journal.pone.0028900.

Bertoni, R., F. Joux, W.H. Jeffrey, P. Conan, M. Pujo-Pay, and L. Oriol. 2011. Influence of water mixing on the inhibitory effect of UV radiation on primary and bacterial production in Mediterranean coastal water. Aquatic Sciences 73: 377-387.

Durrieu de Madron, X., C. Guieu, R. Sempéré, P. Conan, D. Cossa, F. D'Ortenzio, C. Estournel, F. Gazeau, C. Rabouille, L. Stemmann, S. Bonnet, F. Diaz, P. Koubbi, O. Radakovitch, M. Babin, M. Baklouti, C. Bancon-Montigny, S. Belviso, N. Bensoussan, B. Bonsang, I. Bouloubassi, C. Brunet, J.-F. Cadiou, F. Carlotti, M. Chami, S. Charmasson, B. Charrière, J. Dachs, D. Doxaran, J.-C. Dutay, F. Elbaz-Poulichet, M. Eléaume, F. Eyrolles, C. Fernandez, S. Fowler, P. Francour, J.C. Gaertner, R. Galzin, S. Gasparini, J.-F. Ghiglione, J. Gonzalez, C. Goyet, L. Guidi, K. Guizien, L.-E. Heimbürger, S.H.M. Jacquet, W.H. Jeffrey, F. Joux, P. Le Hir, K. Leblanc, D. Lefèvre, C. Lejeusne, R. Lemé, M.-D. Loÿe-Pilot, M. Mallet, L. Méjanelle, F. Mélin, C. Mellon,
B. Mérigot, P.-L. Merle, C. Migon, W.L. Miller, L. Mortier, B. Mostajir, L. Mousseau, T. Moutin, J. Para, T. Pérez, A. Petrenko, J.-C. Poggiale, L. Prieur, M. Pujo-Pay, E. Pulido-Villena, P. Raimbault, A.P. Rees, C. Ridame, J.-F. Rontani, D. Ruiz Pino, M.A. Sicre, V. Taillandier, C. Tamburini, T. Tanaka, I. Taupier-Letage, M. Tedetti, P. Testor, H. Thébault, B. Thouvenin, F. Touratier, J. Tronczynski, C. Ulses, F. Van Wambeke,
V. Vantrepotte, S. Vaz, R. Verney. (The Mermex Group). 2011. Marine Ecosystem Responses to climatic and anthropogenic forcings in the Mediterranean Sea. Progress in Oceanography. 91: 97-166.

Karouna-Renier, N.K., R. A. Snyder, T. Lange, S. Gibson , J. G. Allison, M. G. Wagner, K. R. Rao. 2011. Largemouth bass (Micropterus salmoides) and striped mullet (Mugil cephalus) as vectors of contaminants to human consumers in northwest Florida. Marine Environmental Research 72:96-104.

2010

Caffrey, J.M., N. Bano, J.T. Hollibaugh and J. Haskins. 2010. Effects of upwelling on short-term variability in microbial and biogeochemical processes in estuarine sediments from Elkhorn Slough, California, USA. Aquatic Microbial Ecology. 58: 261-271.

Caffrey, J.M., W.M. Landing, S.D. Nolek, K.J. Gosnell, S.S Bagui, and S.C. Bagui. 2010 Atmospheric deposition of mercury and major ions to the Pensacola (Florida) watershed: spatial, seasonal, and inter-annual variability. Atmospheric Chemistry and Physics 10:1-24.

Landing, W.M., J.M. Caffrey, S.D. Nolek, K.J. Gosnell and W.C. Parker. 2010. Atmospheric deposition of mercury and other trace elements in Pensacola, Florida. Atmospheric Chemistry and Physics 10:4867-4877.

Bullock, A.K., and W.H. Jeffrey. 2010. Temperature and solar radiation interactions on 3 H-leucine incorporation by bacterioplankton in a subtropical estuary. Photochem. Photobiol. 86:593-599.

Vaughan, P.P., A.K. Bullock, F. Joux, and W.H. Jeffrey. 2010. The effects of solar radiation on
the stability of 3 H-thymidine and 3 H-leucine during bacterioplankton production measurements. Limnology and Oceanography Methods 8: 562-566.

Vaughan, P.P., P. Novotny, N. Haubrich, L. McDonald, M. Cochran, J. Serdula, R. Amin, W.H. Jeffrey. 2010. Bacterial Growth Response to Photoactive Quinones. Photochem. Photobiol. 86: 1327-1333.

Moss, J.A., A. Nocker, and R.A. Snyder. 2010. Microbial characteristics of a submerged karst cave system in Northern Florida. Geomicrobiol. 28:8, 719-731

Moss, J.A., R.A. Snyder. 2010. Protozoan pathogens. In C. Hagedorn, A. Blanche and V.J. Harwood (Eds.) Microbial Source Tracking: Methods, Applications, and Case Studies. (In press) Springer-US., New York, NY.

Liebens, J., C. Morherr, N. Karouna-Renier, R.A. Snyder, and K.R. Rao. 2010. Associations between dioxins/furans and dioxin-like PCBs in estuarine sediment and blue crab. Water, Air, & Soil Pollution 222(1-4), 403-419

Murrell, M.C., J.M. Caffrey, D.T. Marcovich, M.W. Beck, B.M. Jarvis, J.D. Hagy III. Ecosystem and plankton metabolism in a warm temperate estuary: comparison of seagrass habitat with adjoin bare habitat. Submitted to Estuaries and Coasts – in revision.

Horak,R.E.A., W. Qin, A. Bertagnolli, A. Nelson, K. Heal, H. Han, M. Heller, A. Schauer, W.H. Jeffrey, E.V. Armbrust, J.W. Moffett, A.E. Ingalls, D.A. Stahl, and A.H. Devol. Influence of light and temperature upon ammonia oxidation activity in marine Thaumarchaeota in the North Pacific Ocean. Limnology and Oceanography (in revision).

Sanders,, R.W., S.L. Cooke, J.M. Fischer, S.B. Fey, A.W. Heinze, W.H. Jeffrey, A.L. Macaluso, R.E. Moeller, D.P. Morris, P.J. Neale, M. Olson, J.D. Pakulski, J.A. Porter, D.M. Schoener, and C.E. Williamson. Shifts in microbial food web structure and productivity after additions of naturally occurring dissolved organic matter: results from large-scale lacustrine mesocosms. Limnology and Oceanography 60: 2130-2144. Moss, JA and RA Snyder. Biofilms for Monitoring Presence of Microsporidia in Environmental Water. Journal of Eukaryotic Microbiology. DOI: 10.1111/jeu.12390.

Kurt. Z., E.E. Mack and J.C. Spain. Natural attenuation of non-volatile contaminants in the capillary fringe. Environ. Sci. Technol. 50:10172–10178.